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SLC35A5 solute carrier family 35 member A5 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100348665, updated on 10-Oct-2024

Summary

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Gene symbol
SLC35A5
Gene description
solute carrier family 35 member A5
See related
Ensembl:ENSOCUG00000005908
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See SLC35A5 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 14 NC_067387.1 (107664078..107705589, complement)

Chromosome 14 - NC_067387.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127482944 Neighboring gene 26S proteasome regulatory subunit 4-like Neighboring gene coiled-coil domain containing 80 Neighboring gene autophagy related 3 Neighboring gene B and T lymphocyte associated Neighboring gene transcription factor Spi-C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067387.1 Chromosome 14 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyrimidine nucleotide-sugar transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyrimidine nucleotide-sugar transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-sugar transporter protein SLC35A5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067387.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    107664078..107705589 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051819048.1 → XP_051675008.1  probable UDP-sugar transporter protein SLC35A5 isoform X1

    UniProtKB/TrEMBL
    G1SPX4

  2. XM_051819050.1 → XP_051675010.1  probable UDP-sugar transporter protein SLC35A5 isoform X2

  3. XM_051819047.1 → XP_051675007.1  probable UDP-sugar transporter protein SLC35A5 isoform X1

    UniProtKB/TrEMBL
    G1SPX4

  4. XM_051819049.1 → XP_051675009.1  probable UDP-sugar transporter protein SLC35A5 isoform X1

    UniProtKB/TrEMBL
    G1SPX4

  5. XM_008266946.3 → XP_008265168.1  probable UDP-sugar transporter protein SLC35A5 isoform X1

    See identical proteins and their annotated locations for XP_008265168.1

    UniProtKB/TrEMBL
    A0A5F9CDC6, G1SPX4
    Related
    ENSOCUP00000005116.3
    Conserved Domains (2) summary
    pfam04142
    Location:34 → 375
    Nuc_sug_transp; Nucleotide-sugar transporter
    cl23754
    Location:97 → 374
    EamA; EamA-like transporter family
Nucleotide Protein
Heading Accession and Version

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