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MGAT4D MGAT4 family member D [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100346813, updated on 10-Oct-2024

Summary

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Gene symbol
MGAT4D
Gene description
MGAT4 family member D
See related
Ensembl:ENSOCUG00000006809
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See MGAT4D in Genome Data Viewer
Location:
chromosome: 15
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 15 NC_067388.1 (21046605..21126692)

Chromosome 15 - NC_067388.1Genomic Context describing neighboring genes Neighboring gene uncoupling protein 1 Neighboring gene ELMO domain containing 2 Neighboring gene protein LLP homolog Neighboring gene 40S ribosomal protein S3a-like Neighboring gene nascent polypeptide-associated complex subunit alpha, muscle-specific form Neighboring gene serine/threonine-protein phosphatase 4 regulatory subunit 1-like Neighboring gene calmegin Neighboring gene short coiled-coil protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067388.1 Chromosome 15 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein MGAT4D
Names
glycosyltransferase 54 domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067388.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    21046605..21126692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051819469.1 → XP_051675429.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein MGAT4D isoform X3

  2. XM_051819470.1 → XP_051675430.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein MGAT4D isoform X3

  3. XM_051819467.1 → XP_051675427.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein MGAT4D isoform X1

    UniProtKB/TrEMBL
    G1SRR8

  4. XM_008267421.3 → XP_008265643.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein MGAT4D isoform X1

    See identical proteins and their annotated locations for XP_008265643.1

    UniProtKB/TrEMBL
    A0A5F9DMM8, G1SRR8
    Related
    ENSOCUP00000005887.4
    Conserved Domains (1) summary
    pfam04666
    Location:96 → 376
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  5. XM_051819471.1 → XP_051675431.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein MGAT4D isoform X3

  6. XM_051819468.1 → XP_051675428.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein MGAT4D isoform X2

Nucleotide Protein
Heading Accession and Version

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