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ATRN attractin [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100345577, updated on 8-Mar-2024

Summary

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Gene symbol
ATRN
Gene description
attractin
See related
Ensembl:ENSOCUG00000012655
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See ATRN in Genome Data Viewer
Location:
chromosome: 4
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 4 NC_067377.1 (18013734..18173587)

Chromosome 4 - NC_067377.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 4 member 11 Neighboring gene dynein axonemal assembly factor 9 Neighboring gene GDNF family receptor alpha 4 Neighboring gene ADAM metallopeptidase domain 33

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067377.1 Chromosome 4 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
attractin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067377.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    18013734..18173587
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002710922.4 → XP_002710968.1  attractin

    UniProtKB/TrEMBL
    A0A5F9CQD5, G1T3T6
    Related
    ENSOCUP00000010899.3
    Conserved Domains (7) summary
    cd00041
    Location:129 → 244
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00055
    Location:1059 → 1104
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    sd00038
    Location:498 → 547
    Kelch; KELCH repeat [structural motif]
    pfam01437
    Location:929 → 980
    PSI; Plexin repeat
    pfam13415
    Location:347 → 397
    Kelch_3; Galactose oxidase, central domain
    pfam13854
    Location:387 → 425
    Kelch_5; Kelch motif
    cl02432
    Location:785 → 917
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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