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COLEC12 collectin subfamily member 12 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100342125, updated on 8-Mar-2024

Summary

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Gene symbol
COLEC12
Gene description
collectin subfamily member 12
See related
Ensembl:ENSOCUG00000022216
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See COLEC12 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 9 NC_067382.1 (54073752..54279059, complement)

Chromosome 9 - NC_067382.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 14 Neighboring gene THO complex subunit 1 Neighboring gene uncharacterized LOC127492402 Neighboring gene centrin 1 Neighboring gene clusterin like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067382.1 Chromosome 9 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collectin-12
Names
collectin sub-family member 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067382.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    54073752..54279059 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051852075.1 → XP_051708035.1  collectin-12 isoform X1

  2. XM_051852076.1 → XP_051708036.1  collectin-12 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials