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LOC100341431 probable C-mannosyltransferase DPY19L2 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100341431, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100341431
Gene description
probable C-mannosyltransferase DPY19L2
See related
Ensembl:ENSOCUG00000009890
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
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Genomic context

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See LOC100341431 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 10 NC_067383.1 (15858185..15953494, complement)

Chromosome 10 - NC_067383.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103349447 Neighboring gene dynein light chain roadblock-type 1-like Neighboring gene uncharacterized LOC127492608 Neighboring gene T-box transcription factor 20 Neighboring gene mortality factor 4 like 1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067383.1 Chromosome 10 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatid development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: probable C-mannosyltransferase DPY19L2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067383.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    15858185..15953494 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008261630.3 → XP_008259852.1  LOW QUALITY PROTEIN: probable C-mannosyltransferase DPY19L2

    UniProtKB/TrEMBL
    G1SY44
    Related
    ENSOCUP00000008517.3
    Conserved Domains (1) summary
    pfam10034
    Location:136 → 779
    Dpy19; Q-cell neuroblast polarization
Nucleotide Protein
Heading Accession and Version

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