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VCP valosin containing protein [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100339785, updated on 8-Mar-2024

Summary

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Gene symbol
VCP
Gene description
valosin containing protein
See related
Ensembl:ENSOCUG00000006433
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See VCP in Genome Data Viewer
Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 1 NC_067374.1 (32939679..32957795)

Chromosome 1 - NC_067374.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L35-like Neighboring gene FA complementation group G Neighboring gene uncharacterized LOC127490693 Neighboring gene SPATA31 subfamily G member 1 Neighboring gene DnaJ heat shock protein family (Hsp40) member B5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067374.1 Chromosome 1 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle disassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde protein transport, ER to cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of VCP-NPL4-UFD1 AAA ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transitional endoplasmic reticulum ATPase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067374.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    32939679..32957795
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002708010.4 → XP_002708056.1  transitional endoplasmic reticulum ATPase

    See identical proteins and their annotated locations for XP_002708056.1

    UniProtKB/TrEMBL
    G1SR03
    Related
    ENSOCUP00000005566.2
    Conserved Domains (1) summary
    TIGR01243
    Location:25 → 764
    CDC48; AAA family ATPase, CDC48 subfamily
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials