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ABO ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100337847, updated on 6-Jun-2024

Summary

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Gene symbol
ABO
Gene description
ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase
See related
Ensembl:ENSOCUG00000017014
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See ABO in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) Unplaced Scaffold NW_026259187.1 (1951760..1963660)

NW_026259187.1Genomic Context describing neighboring genes Neighboring gene myotrophin-like Neighboring gene uncharacterized LOC127487766 Neighboring gene kinetochore protein Spc24-like Neighboring gene zinc finger protein 260 Neighboring gene interleukin enhancer-binding factor 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026259187 Unplaced Scaffold Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histo-blood group ABO system transferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NW_026259187.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    1951760..1963660
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008275426.3 → XP_008273648.1  histo-blood group ABO system transferase isoform X3

    UniProtKB/TrEMBL
    G1TCT6
    Conserved Domains (1) summary
    pfam03414
    Location:62 → 351
    Glyco_transf_6; Glycosyltransferase family 6

  2. XM_008275424.3 → XP_008273646.1  histo-blood group ABO system transferase isoform X1

    UniProtKB/TrEMBL
    G1TCT6
    Related
    ENSOCUP00000014616.3
    Conserved Domains (1) summary
    pfam03414
    Location:84 → 373
    Glyco_transf_6; Glycosyltransferase family 6

  3. XM_051834401.1 → XP_051690361.1  histo-blood group ABO system transferase isoform X2

    UniProtKB/TrEMBL
    G1TCT6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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