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CILP cartilage intermediate layer protein [ Bos taurus (domestic cattle) ]

Gene ID: 100336614, updated on 17-Aug-2024

Summary

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Official Symbol
CILPprovided by VGNC
Official Full Name
cartilage intermediate layer proteinprovided by VGNC
Primary source
VGNC:VGNC:55041
See related
Ensembl:ENSBTAG00000056030
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See CILP in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (12150911..12166355, complement)

Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH domain-containing protein 14-like Neighboring gene caseinolytic mitochondrial matrix peptidase chaperone subunit X Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene poly(ADP-ribose) polymerase family member 16 Neighboring gene uncharacterized LOC132346328

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
cartilage intermediate layer protein 1
Names
cartilage intermediate layer protein, nucleotide pyrophosphohydrolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    12150911..12166355 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024997908.2 → XP_024853676.1  cartilage intermediate layer protein 1 isoform X4

    Related
    ENSBTAP00000101500.1, ENSBTAT00000100012.1
    Conserved Domains (3) summary
    smart00209
    Location:32 → 81
    TSP1; Thrombospondin type 1 repeats
    pfam13620
    Location:106 → 164
    CarboxypepD_reg; Carboxypeptidase regulatory-like domain
    pfam13927
    Location:189 → 258
    Ig_3; Immunoglobulin domain

  2. XM_003586505.6 → XP_003586553.3  cartilage intermediate layer protein 1 isoform X2

    UniProtKB/TrEMBL
    A0AAA9TBD5
    Related
    ENSBTAP00000095296.1, ENSBTAT00000106004.1
    Conserved Domains (4) summary
    smart00209
    Location:153 → 202
    TSP1; Thrombospondin type 1 repeats
    pfam13330
    Location:55 → 139
    Mucin2_WxxW; Mucin-2 protein WxxW repeating region
    pfam13620
    Location:227 → 285
    CarboxypepD_reg; Carboxypeptidase regulatory-like domain
    pfam13927
    Location:310 → 379
    Ig_3; Immunoglobulin domain

  3. XM_059890761.1 → XP_059746744.1  cartilage intermediate layer protein 1 isoform X3

  4. XM_059890760.1 → XP_059746743.1  cartilage intermediate layer protein 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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