U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ACSL6 acyl-CoA synthetase long chain family member 6 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100328719, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
ACSL6
Gene description
acyl-CoA synthetase long chain family member 6
See related
Ensembl:ENSOCUG00000013062
Gene type
protein coding
RefSeq status
INFERRED
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ACSL6 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 3 NC_067376.1 (14985905..15047589, complement)

Chromosome 3 - NC_067376.1Genomic Context describing neighboring genes Neighboring gene folliculin interacting protein 1 Neighboring gene ATP synthase subunit g, mitochondrial-like Neighboring gene meiotic kinetochore factor Neighboring gene uncharacterized LOC127490670 Neighboring gene colony stimulating factor 2 Neighboring gene uncharacterized LOC127490672

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_067376.1 Chromosome 3 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
long-chain-fatty-acid--CoA ligase 6
NP_001164814.1
XP_008253092.1
XP_008253093.1
XP_008253094.1
XP_008253097.1
XP_008253099.1
XP_051699253.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001171343.1 → NP_001164814.1  long-chain-fatty-acid--CoA ligase 6

    See identical proteins and their annotated locations for NP_001164814.1

    Status: INFERRED

    Source sequence(s)
    DP001045
    UniProtKB/TrEMBL
    A0A5F9CK93, B7NZK5
    Related
    ENSOCUP00000044906.1, ENSOCUT00000052857.1
    Conserved Domains (2) summary
    PLN02736
    Location:105 → 719
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:141 → 718
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067376.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    14985905..15047589 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051843293.1 → XP_051699253.1  long-chain-fatty-acid--CoA ligase 6 isoform X4

  2. XM_008254870.3 → XP_008253092.1  long-chain-fatty-acid--CoA ligase 6 isoform X2

    UniProtKB/TrEMBL
    A0A5F9D1Z6
    Conserved Domains (2) summary
    PLN02736
    Location:105 → 712
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:141 → 711
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  3. XM_008254877.3 → XP_008253099.1  long-chain-fatty-acid--CoA ligase 6 isoform X1

    UniProtKB/TrEMBL
    A0A5F9D1Z6, G1U500
    Related
    ENSOCUP00000024476.2
    Conserved Domains (2) summary
    PLN02736
    Location:105 → 719
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:141 → 718
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  4. XM_008254871.3 → XP_008253093.1  long-chain-fatty-acid--CoA ligase 6 isoform X3

    See identical proteins and their annotated locations for XP_008253093.1

    UniProtKB/TrEMBL
    A0A5F9D1Z6
    Conserved Domains (2) summary
    PLN02736
    Location:80 → 694
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:116 → 693
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  5. XM_008254872.3 → XP_008253094.1  long-chain-fatty-acid--CoA ligase 6 isoform X3

    See identical proteins and their annotated locations for XP_008253094.1

    UniProtKB/TrEMBL
    A0A5F9D1Z6
    Conserved Domains (2) summary
    PLN02736
    Location:80 → 694
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:116 → 693
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  6. XM_008254875.3 → XP_008253097.1  long-chain-fatty-acid--CoA ligase 6 isoform X3

    See identical proteins and their annotated locations for XP_008253097.1

    UniProtKB/TrEMBL
    A0A5F9D1Z6
    Related
    ENSOCUP00000039404.1
    Conserved Domains (2) summary
    PLN02736
    Location:80 → 694
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:116 → 693
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.