ostm1 osteoclastogenesis associated transmembrane protein 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: ostm1provided by ZNC
Official Full Name: osteoclastogenesis associated transmembrane protein 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-081104-270
See related: Ensembl:ENSDARG00000069808 AllianceGenome:ZFIN:ZDB-GENE-081104-270
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fa04a09; wu:fa04a09; si:ch73-257c13.3
Summary: Predicted to be located in membrane. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in autosomal recessive osteopetrosis 5. Orthologous to human OSTM1 (osteoclastogenesis associated transmembrane protein 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 20

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	20	NC_007131.7 (32478115..32491036)
105	previous assembly	GRCz10 (GCF_000002035.5)	20	NC_007131.6 (32575238..32584956)

Chromosome 20 - NC_007131.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: osteopetrosis-associated transmembrane protein 1

Names: osteopetrosis associated transmembrane protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001386310.1 → NP_001373239.1 osteopetrosis-associated transmembrane protein 1 precursor

Status: VALIDATED

Source sequence(s)

CU207298

UniProtKB/TrEMBL

A0A8M1RHW9

Related

ENSDARP00000119392.2, ENSDART00000145269.3

Conserved Domains (1) summary

pfam09777
Location:73 → 295

OSTMP1; Osteopetrosis-associated transmembrane protein 1 precursor