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Vmn1r3 vomeronasal 1 receptor 3 [ Mus musculus (house mouse) ]

Gene ID: 100312471, updated on 17-Aug-2024

Summary

Official Symbol
Vmn1r3provided by MGI
Official Full Name
vomeronasal 1 receptor 3provided by MGI
Primary source
MGI:MGI:4438436
See related
Ensembl:ENSMUSG00000115466 AllianceGenome:MGI:4438436
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm11778
Expression
Low expression observed in reference dataset See more
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Genomic context

See Vmn1r3 in Genome Data Viewer
Location:
4 A1; 4 1.77 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (3184385..3185305, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (3184385..3185305, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor, pseudogene 3 Neighboring gene STARR-seq mESC enhancer starr_09404 Neighboring gene vomeronasal 1 receptor 2 Neighboring gene STARR-seq mESC enhancer starr_09405 Neighboring gene predicted gene, 52720 Neighboring gene predicted gene, 46840

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
vomeronasal 1 receptor 3
Names
vomeronasal 1 receptor Vmn1r3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001167535.1NP_001161007.1  vomeronasal 1 receptor 3

    See identical proteins and their annotated locations for NP_001161007.1

    Status: PROVISIONAL

    Source sequence(s)
    AL807802
    Consensus CDS
    CCDS51108.1
    UniProtKB/TrEMBL
    A2AMT7
    Related
    ENSMUSP00000100790.3, ENSMUST00000105159.5
    Conserved Domains (1) summary
    pfam03402
    Location:44289
    V1R; Vomeronasal organ pheromone receptor family, V1R

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    3184385..3185305 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)