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PAL2.1 phenylalanine ammonia-lyase 2.1 [ Glycine max (soybean) ]

Gene ID: 100302735, updated on 7-Dec-2023

Summary

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Gene symbol
PAL2.1
Gene description
phenylalanine ammonia-lyase 2.1
Locus tag
GLYMA_10G058200v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
Also known as
PAL2; pal3; GmPAL2.1
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Genomic context

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See PAL2.1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 10 NC_038246.2 (5294635..5299091, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 10 NC_038246.1 (5329042..5333498, complement)

Chromosome 10 - NC_038246.2Genomic Context describing neighboring genes Neighboring gene adenosine kinase 2-like Neighboring gene isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial Neighboring gene ethylene-insensitive protein 2 Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phenylalanine ammonia-lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-phenylalanine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phenylalanine ammonia-lyase 2.1
NP_001236956.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001250027.2 → NP_001236956.2  phenylalanine ammonia-lyase 2.1

    Status: VALIDATED

    Source sequence(s)
    ACUP04003425, AK244923
    UniProtKB/TrEMBL
    C6KHU4, I1L905
    Conserved Domains (1) summary
    PLN02457
    Location:15 → 717
    PLN02457; phenylalanine ammonia-lyase

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038246.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    5294635..5299091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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