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LOC100301884 starch synthase IIa-2 [ Glycine max (soybean) ]

Gene ID: 100301884, updated on 18-Sep-2024

Summary

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Gene symbol
LOC100301884
Gene description
starch synthase IIa-2
Locus tag
GLYMA_19G022900v4
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100301884 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
8
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 19 NC_038255.2 (2609263..2617278)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 19 NC_038255.1 (2625135..2633150)

Chromosome 19 - NC_038255.2Genomic Context describing neighboring genes Neighboring gene TMV resistance protein N Neighboring gene structural maintenance of chromosomes protein 4 Neighboring gene uncharacterized LOC100817504 Neighboring gene C2C2-Zn Dof transcription factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch synthase IIa-2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001248882.1 → NP_001235811.1  starch synthase IIa-2

    See identical proteins and their annotated locations for NP_001235811.1

    Status: PROVISIONAL

    Source sequence(s)
    FJ561741
    UniProtKB/TrEMBL
    B9VJS7
    Conserved Domains (1) summary
    TIGR02095
    Location:283 → 770
    glgA; glycogen/starch synthase, ADP-glucose type

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038255.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    2609263..2617278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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