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LOC100288416 ATP synthase membrane subunit f pseudogene [ Homo sapiens (human) ]

Gene ID: 100288416, updated on 10-Oct-2023

Summary

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Gene symbol
LOC100288416
Gene description
ATP synthase membrane subunit f pseudogene
See related
Ensembl:ENSG00000213556
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC100288416 in Genome Data Viewer
Location:
9q31.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (108836333..108836594)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (121005486..121005747)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (111598613..111598874)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:111396539-111397738 Neighboring gene ribosomal protein L36 pseudogene 14 Neighboring gene NANOG hESC enhancer GRCh37_chr9:111425130-111425686 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:111494497-111494997 Neighboring gene HNF4 motif-containing MPRA enhancer 53 Neighboring gene Sharpr-MPRA regulatory region 10106 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:111541867-111543066 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:111564123-111564676 Neighboring gene ribosomal protein L36a pseudogene 35 Neighboring gene actin like 7B Neighboring gene actin like 7A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • ATP synthase, H+ transporting, mitochondrial Fo complex subunit F2 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_030093.1 

    Range
    101..362
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    108836333..108836594
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    121005486..121005747
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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