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TSEN15P1 tRNA splicing endonuclease subunit 15 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100288179, updated on 17-Jun-2024

Summary

Official Symbol
TSEN15P1provided by HGNC
Official Full Name
tRNA splicing endonuclease subunit 15 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:43962
See related
AllianceGenome:HGNC:43962
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See TSEN15P1 in Genome Data Viewer
Location:
17p11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (17456401..17457423)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (17401576..17402596)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (17359715..17360737)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:17291286-17291786 Neighboring gene ribosomal protein L13 pseudogene 12 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11799 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:17306668-17307222 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:17307223-17307775 Neighboring gene Sharpr-MPRA regulatory region 14253 Neighboring gene NFE2L2 motif-containing MPRA enhancer 126 Neighboring gene MPRA-validated peak2757 silencer Neighboring gene ligand of numb-protein X 1, E3 ubiquitin protein ligase pseudogene Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:17345077-17345922 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr17:17349107-17350306 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:17353405-17353906 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11800 Neighboring gene mediator complex subunit 9 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8243 Neighboring gene ras related dexamethasone induced 1

Genomic regions, transcripts, and products

General gene information

Other Names

  • TSEN15 tRNA splicing endonuclease subunit pseudogene 1
  • tRNA splicing endonuclease 15 homolog pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_030099.3 

    Range
    101..1123
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    17456401..17457423
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    17401576..17402596
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    GenBank, FASTA, Sequence Viewer (Graphics)