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SSXP10 SSX family pseudogene 10 [ Homo sapiens (human) ]

Gene ID: 100287603, updated on 17-Sep-2024

Summary

Official Symbol
SSXP10provided by HGNC
Official Full Name
SSX family pseudogene 10provided by HGNC
Primary source
HGNC:HGNC:30638
See related
AllianceGenome:HGNC:30638
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
psiSSX10
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Genomic context

See SSXP10 in Genome Data Viewer
Location:
6q22.31
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (118589052..118590241)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (119774174..119775351)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (118910215..118911404)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene centrosomal protein 85 like Neighboring gene uncharacterized LOC107986524 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:118894930-118896129 Neighboring gene phospholamban Neighboring gene MPRA-validated peak6062 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:118951260-118951854 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:118951855-118952449 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17501 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17502 Neighboring gene uncharacterized LOC124901388 Neighboring gene Sharpr-MPRA regulatory region 6198 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17503 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25013 Neighboring gene selenoprotein K pseudogene 3

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022942.2 

    Range
    101..1290
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    118589052..118590241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    119774174..119775351
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)