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LOC100284241 uncharacterized LOC100284241 [ Zea mays ]

Gene ID: 100284241, updated on 10-Oct-2024

Summary

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Gene symbol
LOC100284241
Gene description
uncharacterized LOC100284241
Locus tag
ZEAMMB73_Zm00001d034062
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
cl16591_1; GRMZM2G123714
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Genomic context

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See LOC100284241 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 1 NC_050096.1 (284551968..284567824, complement)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 1 NC_024459.2 (282851763..282854345, complement)

Chromosome 1 - NC_050096.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100384557 Neighboring gene 60S ribosomal protein L13a-like Neighboring gene small nucleolar RNA R12 Neighboring gene uncharacterized LOC100216647 Neighboring gene uncharacterized LOC100280603

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene discovery and annotation using LCM-454 transcriptome sequencing. Emrich SJ, et al. Genome Res, 2007 Jan. PMID 17095711, Free PMC Article
  2. Annotation and expression profile analysis of 2073 full-length cDNAs from stress-induced maize (Zea mays L.) seedlings. Jia J, et al. Plant J, 2006 Dec. PMID 17076806
  3. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
  4. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized LOC100284241; uncharacterized protein LOC100284241
Names
PLASMODESMATA CALLOSE-BINDING PROTEIN 2
cl16591_1(91)
glucan endo-1,3-beta-glucosidase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001157136.2 → NP_001150608.2  uncharacterized LOC100284241

    Status: VALIDATED

    Source sequence(s)
    BT061763, CO521785, DW879589, DW966520
    UniProtKB/TrEMBL
    A0A804M473

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050096.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    284551968..284567824 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035967658.1 → XP_035823551.1  uncharacterized protein LOC100284241 isoform X2

    UniProtKB/TrEMBL
    A0A804M475
    Conserved Domains (1) summary
    smart00768
    Location:129 → 212
    X8; Possibly involved in carbohydrate binding

  2. XM_035967655.1 → XP_035823548.1  uncharacterized protein LOC100284241 isoform X1

    UniProtKB/TrEMBL
    A0A804M474, A0A804M475
    Conserved Domains (1) summary
    smart00768
    Location:129 → 212
    X8; Possibly involved in carbohydrate binding
Nucleotide Protein
Heading Accession and Version

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