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LOC100273642 Carbohydrate-binding X8 domain superfamily protein [ Zea mays ]

Gene ID: 100273642, updated on 18-Aug-2023

Summary

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Gene symbol
LOC100273642
Gene description
Carbohydrate-binding X8 domain superfamily protein
Locus tag
ZEAMMB73_Zm00001d002348
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
GRMZM2G093632
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Genomic context

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See LOC100273642 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 2 NC_050097.1 (10947528..10949466)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 2 NC_024460.2 (10671544..10673482)

Chromosome 2 - NC_050097.1Genomic Context describing neighboring genes Neighboring gene 36.4 kDa proline-rich protein-like Neighboring gene protein ALP1-like Neighboring gene ent-kaur-16-ene synthase, chloroplastic Neighboring gene ent-kaurene synthase B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
  2. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
  3. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC100273642

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001148058.1 → NP_001141530.1  uncharacterized protein LOC100273642 precursor

    See identical proteins and their annotated locations for NP_001141530.1

    Status: PREDICTED

    Source sequence(s)
    BT041552
    UniProtKB/TrEMBL
    A0A3L6FWG8, B4FWR4
    Conserved Domains (1) summary
    smart00768
    Location:247 → 325
    X8; Possibly involved in carbohydrate binding

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050097.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    10947528..10949466
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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