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LOC100272792 beta-glucosidase [ Zea mays ]

Gene ID: 100272792, updated on 14-Dec-2023

Summary

Gene symbol
LOC100272792
Gene description
beta-glucosidase
Locus tag
ZEAMMB73_Zm00001d025847
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
GRMZM2G031628; GRMZM2G031660
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Genomic context

Location:
chromosome: 10
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 10 NC_050105.1 (132857656..132863594, complement)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 10 NC_024468.2 (131489881..131495778, complement)

Chromosome 10 - NC_050105.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100276451 Neighboring gene uncharacterized LOC100193998 Neighboring gene peptidoglycan binding domain containing protein Neighboring gene probable xyloglucan 6-xylosyltransferase 1

Genomic regions, transcripts, and products

General protein information

Preferred Names
beta-glucosidase
Names
Beta-glucosidase 47

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001147245.2NP_001140717.1  beta-glucosidase precursor

    See identical proteins and their annotated locations for NP_001140717.1

    Status: PROVISIONAL

    Source sequence(s)
    BT039444
    UniProtKB/TrEMBL
    A0A804RJI5, B4FQQ6
    Conserved Domains (1) summary
    cl23725
    Location:38501
    Glyco_hydro_1; Glycosyl hydrolase family 1

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050105.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    132857656..132863594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008663352.4XP_008661574.1  beta-glucosidase isoform X1

    See identical proteins and their annotated locations for XP_008661574.1

    UniProtKB/TrEMBL
    A0A804RJI5
    Conserved Domains (1) summary
    cl23725
    Location:38452
    Glyco_hydro_1; Glycosyl hydrolase family 1
  2. XM_035962954.1XP_035818847.1  beta-glucosidase isoform X2

    UniProtKB/TrEMBL
    A0A804RJI5
    Conserved Domains (1) summary
    cl23725
    Location:38452
    Glyco_hydro; Glycosyl hydrolases
  3. XM_008663351.4XP_008661573.1  beta-glucosidase isoform X1

    See identical proteins and their annotated locations for XP_008661573.1

    UniProtKB/TrEMBL
    A0A804RJI5
    Conserved Domains (1) summary
    cl23725
    Location:38452
    Glyco_hydro_1; Glycosyl hydrolase family 1

RNA

  1. XR_002265429.3 RNA Sequence

  2. XR_002749353.2 RNA Sequence

  3. XR_004852978.1 RNA Sequence

  4. XR_004852979.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001154693.1: Suppressed sequence

    Description
    NM_001154693.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.