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Uckl1os uridine-cytidine kinase 1-like 1, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 100271841, updated on 17-Aug-2024

Summary

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Official Symbol
Uckl1osprovided by MGI
Official Full Name
uridine-cytidine kinase 1-like 1, opposite strandprovided by MGI
Primary source
MGI:MGI:3801877
See related
Ensembl:ENSMUSG00000010492 AllianceGenome:MGI:3801877
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm16119
Expression
Broad expression in adrenal adult (RPKM 32.1), stomach adult (RPKM 12.5) and 21 other tissues See more
Orthologs
human all
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Genomic context

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See Uckl1os in Genome Data Viewer
Location:
2 H4; 2 103.67 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (181220273..181226908)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (181578480..181585115)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene tumor protein D52-like 2 Neighboring gene predicted gene, 25184 Neighboring gene DnaJ heat shock protein family (Hsp40) member C5 Neighboring gene uridine-cytidine kinase 1-like 1 Neighboring gene STARR-positive B cell enhancer ABC_E3426 Neighboring gene zinc finger protein 512B Neighboring gene microRNA 7006 Neighboring gene sterile alpha motif domain containing 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Initial sequencing and comparative analysis of the mouse genome. Mouse Genome Sequencing Consortium, et al. Nature, 2002 Dec 5. PMID 12466850
  2. Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method. Piao Y, et al. Genome Res, 2001 Sep. PMID 11544199, Free PMC Article
  3. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  4. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • AL844529.1

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027289.1 RNA Sequence

    Status: PREDICTED

    Description
    Transcript Variant: This variant (2) has multiple splice differences and different exons compared to variant 1.
    Source sequence(s)
    AK039436
    Related
    ENSMUST00000152365.2

  2. NR_027290.1 RNA Sequence

    Status: PREDICTED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    BC047220
    Related
    ENSMUST00000122831.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    181220273..181226908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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