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RPS18P13 ribosomal protein S18 pseudogene 13 [ Homo sapiens (human) ]

Gene ID: 100271364, updated on 17-Sep-2024

Summary

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Official Symbol
RPS18P13provided by HGNC
Official Full Name
ribosomal protein S18 pseudogene 13provided by HGNC
Primary source
HGNC:HGNC:36901
See related
Ensembl:ENSG00000243455 AllianceGenome:HGNC:36901
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS18_8_1634
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Genomic context

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See RPS18P13 in Genome Data Viewer
Location:
19p13.11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (18048629..18049134)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (18182729..18183234)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (18159439..18159944)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene CS pseudogene 3 Neighboring gene NAD(P)HX epimerase pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr19:18160178-18160339 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:18162377-18162878 Neighboring gene Sharpr-MPRA regulatory region 12288 Neighboring gene interleukin 12 receptor subunit beta 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14295 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14296 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10368 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10369 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10370 Neighboring gene microtubule associated serine/threonine kinase 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:18220925-18221494 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:18228711-18229582 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr19:18232970-18234169 Neighboring gene uncharacterized LOC124904650

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009978.1 

    Range
    101..606
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    18048629..18049134
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    18182729..18183234
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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