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RPL27AP3 ribosomal protein L27a pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 100271298, updated on 17-Sep-2024

Summary

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Official Symbol
RPL27AP3provided by HGNC
Official Full Name
ribosomal protein L27a pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:35553
See related
Ensembl:ENSG00000236667 AllianceGenome:HGNC:35553
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL27A_1_302
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Genomic context

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See RPL27AP3 in Genome Data Viewer
Location:
2q31.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (180938797..180939318, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (181428423..181428944, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (181803524..181804045, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene SWI/SNF complex antagonist associated with prostate cancer 1 Neighboring gene uncharacterized LOC105373771 Neighboring gene MPRA-validated peak3955 silencer Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:181678325-181679524 Neighboring gene ferritin heavy chain 1 pseudogene 20 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12155 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16822 Neighboring gene UBE2E3 divergent transcript Neighboring gene ubiquitin conjugating enzyme E2 E3 Neighboring gene uncharacterized LOC107985831

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011002.3 

    Range
    101..622
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    180938797..180939318 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    181428423..181428944 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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