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LOC100261650 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [ Vitis vinifera (wine grape) ]

Gene ID: 100261650, updated on 23-Oct-2023

Summary

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Gene symbol
LOC100261650
Gene description
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
Locus tag
VIT_00029339001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100261650 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 17 NC_081821.1 (17433209..17443018)
102 previous assembly 12X (GCF_000003745.3) 17 NC_012023.3 (14645172..14654834)

Chromosome 17 - NC_081821.1Genomic Context describing neighboring genes Neighboring gene succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial Neighboring gene uncharacterized LOC104882429 Neighboring gene tubulin beta-3 chain Neighboring gene uncharacterized LOC100266699

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oligosaccharyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081821.1 Reference ASM3070453v1 Primary Assembly

    Range
    17433209..17443018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002269083.5 → XP_002269119.2  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

    UniProtKB/TrEMBL
    F6HVR5
    Conserved Domains (2) summary
    COG1287
    Location:30 → 735
    Stt3; Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones]
    pfam02516
    Location:46 → 527
    STT3; Oligosaccharyl transferase STT3 subunit
Nucleotide Protein
Heading Accession and Version

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