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LOC100261154 alpha-galactosidase [ Vitis vinifera (wine grape) ]

Gene ID: 100261154, updated on 23-Oct-2023

Summary

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Gene symbol
LOC100261154
Gene description
alpha-galactosidase
Locus tag
VIT_00034334001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100261154 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 10 NC_081814.1 (27252364..27259706)
102 previous assembly 12X (GCF_000003745.3) 10 NC_012016.3 (17912349..17919694)

Chromosome 10 - NC_081814.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109123309 Neighboring gene alpha-galactosidase 1 Neighboring gene alpha-galactosidase Neighboring gene uncharacterized LOC100262808

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-galactosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081814.1 Reference ASM3070453v1 Primary Assembly

    Range
    27252364..27259706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002268675.5 → XP_002268711.1  alpha-galactosidase

    See identical proteins and their annotated locations for XP_002268711.1

    UniProtKB/TrEMBL
    A5ALZ9, D7TXW6
    Conserved Domains (2) summary
    PLN02808
    Location:24 → 409
    PLN02808; alpha-galactosidase
    PLN02692
    Location:11 → 408
    PLN02692; alpha-galactosidase
Nucleotide Protein
Heading Accession and Version

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