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LOC100257247 probable NAD(P)H dehydrogenase (quinone) FQR1-like 2 [ Vitis vinifera (wine grape) ]

Gene ID: 100257247, updated on 23-Oct-2023

Summary

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Gene symbol
LOC100257247
Gene description
probable NAD(P)H dehydrogenase (quinone) FQR1-like 2
Locus tag
VIT_00031920001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100257247 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 3 NC_081807.1 (4005913..4009229)
102 previous assembly 12X (GCF_000003745.3) 3 NC_012009.3 (5411005..5414261, complement)

Chromosome 3 - NC_081807.1Genomic Context describing neighboring genes Neighboring gene arabinosyltransferase RRA2-like Neighboring gene light-inducible protein CPRF3 Neighboring gene deSI-like protein At4g17486 Neighboring gene NEDD8-conjugating enzyme Ubc12 Neighboring gene uncharacterized LOC109122338

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article
  2. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FMN binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD(P)H dehydrogenase (quinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable NAD(P)H dehydrogenase (quinone) FQR1-like 2
Names
minor allergen Alt a 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081807.1 Reference ASM3070453v1 Primary Assembly

    Range
    4005913..4009229
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002280950.4 → XP_002280986.1  probable NAD(P)H dehydrogenase (quinone) FQR1-like 2

    See identical proteins and their annotated locations for XP_002280986.1

    UniProtKB/TrEMBL
    A0A438CDV2, D7TPY0
    Conserved Domains (1) summary
    cl00438
    Location:51 → 247
    FMN_red; NADPH-dependent FMN reductase
Nucleotide Protein
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