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LOC100253824 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [ Vitis vinifera (wine grape) ]

Gene ID: 100253824, updated on 20-Nov-2023

Summary

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Gene symbol
LOC100253824
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
Locus tag
VIT_00031857001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100253824 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 3 NC_081807.1 (4473373..4475689)
102 previous assembly 12X (GCF_000003745.3) 3 NC_012009.3 (4947898..4950213, complement)

Chromosome 3 - NC_081807.1Genomic Context describing neighboring genes Neighboring gene xanthotoxin 5-hydroxylase CYP82C4 Neighboring gene protopine 6-monooxygenase-like Neighboring gene cytochrome P450 CYP82H23-like Neighboring gene cytochrome P450 CYP82D47-like Neighboring gene cytochrome P450 CYP82H23-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081807.1 Reference ASM3070453v1 Primary Assembly

    Range
    4473373..4475689
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059735932.1 → XP_059591915.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

    UniProtKB/TrEMBL
    F6HQG2
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials