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LOC100253765 peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase [ Vitis vinifera (wine grape) ]

Gene ID: 100253765, updated on 23-Oct-2023

Summary

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Gene symbol
LOC100253765
Gene description
peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
Locus tag
VIT_00021825001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
Also known as
GO:0008270 GO:0046872 GO:0000224 GO:0016787; GO:0004527 GO:0004519 GO:0003723 GO:0003676 GO:0003964 GO:0006278
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Genomic context

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See LOC100253765 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 14 NC_081818.1 (6812548..6867021, complement)
102 previous assembly 12X (GCF_000003745.3) 14 NC_012020.3 (6812003..6867062, complement)

Chromosome 14 - NC_081818.1Genomic Context describing neighboring genes Neighboring gene probable ribose-5-phosphate isomerase 3, chloroplastic Neighboring gene PITH domain-containing protein At3g04780 Neighboring gene cytochrome P450 81Q32 Neighboring gene protein ECERIFERUM 26-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deglycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein quality control for misfolded or incompletely synthesized proteins IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081818.1 Reference ASM3070453v1 Primary Assembly

    Range
    6812548..6867021 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002278386.5 → XP_002278422.1  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase

    See identical proteins and their annotated locations for XP_002278422.1

    UniProtKB/TrEMBL
    D7TUL1
    Conserved Domains (3) summary
    cd01769
    Location:6 → 46
    UBL; Ubiquitin-like domain of UBL
    pfam01841
    Location:226 → 303
    Transglut_core; Transglutaminase-like superfamily
    pfam03835
    Location:287 → 397
    Rad4; Rad4 transglutaminase-like domain
Nucleotide Protein
Heading Accession and Version

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