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LOC100251280 L-ascorbate oxidase [ Vitis vinifera (wine grape) ]

Gene ID: 100251280, updated on 23-Oct-2023

Summary

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Gene symbol
LOC100251280
Gene description
L-ascorbate oxidase
Locus tag
VIT_00037479001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 6 NC_081810.1 (16016122..16020668)
102 previous assembly 12X (GCF_000003745.3) 6 NC_012012.3 (12971375..12975964)

Chromosome 6 - NC_081810.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene subtilisin-like protease SBT4.13 Neighboring gene disease resistance protein RPM1-like Neighboring gene disease resistance protein RPM1-like Neighboring gene disease resistance protein RPM1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome. Da Silva C, et al. Plant Cell, 2013 Dec. PMID 24319081, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasmodesma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-ascorbate oxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081810.1 Reference ASM3070453v1 Primary Assembly

    Range
    16016122..16020668
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002275642.4 → XP_002275678.1  L-ascorbate oxidase

    UniProtKB/TrEMBL
    A5AGG0, F6HA36
    Conserved Domains (4) summary
    cd13845
    Location:32 → 151
    CuRO_1_AAO; The first cupredoxin domain of plant Ascorbate oxidase
    cd13893
    Location:373 → 561
    CuRO_3_AAO; The third cupredoxin domain of plant Ascorbate oxidase
    TIGR03388
    Location:31 → 570
    ascorbase; L-ascorbate oxidase, plant type
    cl19115
    Location:162 → 327
    Cupredoxin; Cupredoxin superfamily
Nucleotide Protein
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