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LOC100249347 UDP-glycosyltransferase 88F5 [ Vitis vinifera (wine grape) ]

Gene ID: 100249347, updated on 20-Nov-2023

Summary

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Gene symbol
LOC100249347
Gene description
UDP-glycosyltransferase 88F5
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100249347 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 18 NC_081822.1 (30707675..30709534, complement)
102 previous assembly 12X (GCF_000003745.3) 18 NC_012024.3 (25334339..25336191, complement)

Chromosome 18 - NC_081822.1Genomic Context describing neighboring genes Neighboring gene UDP-glycosyltransferase 88F5-like Neighboring gene UDP-glycosyltransferase 88A1-like Neighboring gene UDP-glycosyltransferase 88F5-like Neighboring gene replication protein A 70 kDa DNA-binding subunit B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome. Da Silva C, et al. Plant Cell, 2013 Dec. PMID 24319081, Free PMC Article
  2. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glycosyltransferase 88F5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081822.1 Reference ASM3070453v1 Primary Assembly

    Range
    30707675..30709534 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002272309.5 → XP_002272345.1  UDP-glycosyltransferase 88F5

    UniProtKB/TrEMBL
    A5B1Z2, F6I3X8
    Conserved Domains (1) summary
    cl10013
    Location:4 → 478
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
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