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LOC100247997 anthocyanidin 3-O-glucosyltransferase 5 [ Vitis vinifera (wine grape) ]

Gene ID: 100247997, updated on 23-Oct-2023

Summary

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Gene symbol
LOC100247997
Gene description
anthocyanidin 3-O-glucosyltransferase 5
Locus tag
VIT_00018499001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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Location:
chromosome: 16
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 16 NC_081820.1 (19066503..19068236, complement)
102 previous assembly 12X (GCF_000003745.3) 16 NC_012022.3 (14269556..14271293, complement)

Chromosome 16 - NC_081820.1Genomic Context describing neighboring genes Neighboring gene proteinaceous RNase P 2 Neighboring gene uncharacterized LOC109124203 Neighboring gene zinc finger A20 and AN1 domain-containing stress-associated protein 1 Neighboring gene uncharacterized LOC104882125 Neighboring gene probable aminotransferase ACS12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome. Da Silva C, et al. Plant Cell, 2013 Dec. PMID 24319081, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anthocyanidin 3-O-glucosyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081820.1 Reference ASM3070453v1 Primary Assembly

    Range
    19066503..19068236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002269143.4 → XP_002269179.1  anthocyanidin 3-O-glucosyltransferase 5

    UniProtKB/TrEMBL
    A0A438EE83, F6HAJ7
    Conserved Domains (1) summary
    cl10013
    Location:1 → 463
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
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