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LOC100247851 galactan beta-1,4-galactosyltransferase GALS1 [ Vitis vinifera (wine grape) ]

Gene ID: 100247851, updated on 29-Sep-2023

Summary

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Gene symbol
LOC100247851
Gene description
galactan beta-1,4-galactosyltransferase GALS1
Locus tag
VIT_00013454001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100247851 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 18 NC_081822.1 (330376..332734, complement)
102 previous assembly 12X (GCF_000003745.3) 18 NC_012024.3 (325045..327400, complement)

Chromosome 18 - NC_081822.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100240987 Neighboring gene protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 Neighboring gene protein VACUOLELESS GAMETOPHYTES Neighboring gene protein VACUOLELESS GAMETOPHYTES

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article
  2. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
galactan beta-1,4-galactosyltransferase GALS1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081822.1 Reference ASM3070453v1 Primary Assembly

    Range
    330376..332734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019216815.2 → XP_019072360.1  galactan beta-1,4-galactosyltransferase GALS1

    UniProtKB/TrEMBL
    A0A438K3M6
Nucleotide Protein
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Gene LinkOut

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