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LOC100247220 Golgi transport complex-related-like [ Vitis vinifera (wine grape) ]

Gene ID: 100247220, updated on 20-Nov-2023

Summary

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Gene symbol
LOC100247220
Gene description
Golgi transport complex-related-like
Locus tag
VIT_00020852001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100247220 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 12 NC_081816.1 (1118060..1124202)
102 previous assembly 12X (GCF_000003745.3) 12 NC_012018.3 (1094053..1100165)

Chromosome 12 - NC_081816.1Genomic Context describing neighboring genes Neighboring gene callose synthase 7 Neighboring gene uncharacterized LOC100260754 Neighboring gene uncharacterized LOC104880843 Neighboring gene transfer RNA arginine (anticodon ACG)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081816.1 Reference ASM3070453v1 Primary Assembly

    Range
    1118060..1124202
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059741376.1 → XP_059597359.1  conserved oligomeric Golgi complex subunit 5

    UniProtKB/TrEMBL
    E0CU34

RNA

  1. XR_009467197.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials