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LOC100245803 endochitinase EP3 [ Vitis vinifera (wine grape) ]

Gene ID: 100245803, discontinued on 28-Sep-2023

Summary

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Gene symbol
LOC100245803
Gene description
endochitinase EP3
Gene type
protein coding
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100245803 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
102 latest, but not current 12X (GCF_000003745.3) 5 NC_012011.3 (23567538..23568592, complement)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012011.3 Chromosome 5 Reference 12X Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
endochitinase EP3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vitis vinifera Annotation Release 102 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 12X Primary Assembly

Genomic

  1. NC_012011.3 Reference 12X Primary Assembly

    Range
    23567538..23568592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002274722.4 → XP_002274758.1  

    Conserved Domains (3) summary
    cd00325
    Location:77 → 274
    chitinase_glyco_hydro_19; Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some ...
    pfam00182
    Location:76 → 274
    Glyco_hydro_19; Chitinase class I
    pfam00187
    Location:34 → 60
    Chitin_bind_1; Chitin recognition protein

Gene LinkOut

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Molecular Biology Databases
Research Materials