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LOC100241917 starch synthase 3, chloroplastic/amyloplastic [ Vitis vinifera (wine grape) ]

Gene ID: 100241917, updated on 18-Sep-2024

Summary

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Gene symbol
LOC100241917
Gene description
starch synthase 3, chloroplastic/amyloplastic
Locus tag
VIT_00004632001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100241917 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 10 NC_081814.1 (1083898..1104987, complement)
102 previous assembly 12X (GCF_000003745.3) 10 NC_012016.3 (977291..999328, complement)

Chromosome 10 - NC_081814.1Genomic Context describing neighboring genes Neighboring gene probable beta-1,3-galactosyltransferase 2 Neighboring gene protein S40-6 Neighboring gene ATP synthase gamma chain, chloroplastic Neighboring gene uncharacterized LOC100247051

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch synthase 3, chloroplastic/amyloplastic
Names
soluble starch synthase 3, chloroplastic/amyloplastic-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081814.1 Reference ASM3070453v1 Primary Assembly

    Range
    1083898..1104987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059740399.1 → XP_059596382.1  starch synthase 3, chloroplastic/amyloplastic

  2. XM_059740401.1 → XP_059596384.1  starch synthase 3, chloroplastic/amyloplastic

  3. XM_059740400.1 → XP_059596383.1  starch synthase 3, chloroplastic/amyloplastic

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
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