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CRYBG1 crystallin beta-gamma domain containing 1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100231062, updated on 13-Aug-2024

Summary

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Gene symbol
CRYBG1
Gene description
crystallin beta-gamma domain containing 1
See related
Ensembl:ENSTGUG00000012192
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Also known as
AIM1
Orthologs
human mouse all
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Genomic context

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See CRYBG1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
24
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 3 NC_044214.2 (43456201..43551132)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 3 NC_045001.1 (42548552..42594702)

Chromosome 3 - NC_044214.2Genomic Context describing neighboring genes Neighboring gene PR/SET domain 1 Neighboring gene autophagy related 5 Neighboring gene uncharacterized LOC115494301 Neighboring gene uncharacterized LOC121469695 Neighboring gene uncharacterized LOC121469694 Neighboring gene reticulon 4 interacting protein 1 Neighboring gene glutaminyl-tRNA amidotransferase subunit QRSL1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of eye lens IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lens development in camera-type eye IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in visual perception IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta/gamma crystallin domain-containing protein 1
Names
absent in melanoma 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044214.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    43456201..43551132
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041715106.1 → XP_041571040.1  beta/gamma crystallin domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A674G8Z3
    Conserved Domains (3) summary
    smart00247
    Location:1262 → 1350
    XTALbg; Beta/gamma crystallins
    cd00161
    Location:1625 → 1754
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    cl02528
    Location:1454 → 1532
    Crystall; Beta/Gamma crystallin

  2. XM_030269355.3 → XP_030125215.3  beta/gamma crystallin domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A674GUX0
    Conserved Domains (3) summary
    smart00247
    Location:1004 → 1092
    XTALbg; Beta/gamma crystallins
    cd00161
    Location:1367 → 1496
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    cl02528
    Location:1196 → 1274
    Crystall; Beta/Gamma crystallin
Nucleotide Protein
Heading Accession and Version

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