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B4GALT4 beta-1,4-galactosyltransferase 4 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100230291, updated on 13-Aug-2024

Summary

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Gene symbol
B4GALT4
Gene description
beta-1,4-galactosyltransferase 4
See related
Ensembl:ENSTGUG00000013395
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See B4GALT4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 1 NC_044211.2 (23545044..23572564, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 1 NC_044998.1 (23304735..23332190, complement)

Chromosome 1 - NC_044211.2Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 31 Neighboring gene galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 Neighboring gene beta-1,4-galactosyltransferase 3 Neighboring gene transmembrane protein 39A Neighboring gene fatty acid amide hydrolase Neighboring gene chromodomain helicase DNA binding protein 1 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044211.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    23545044..23572564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030265952.3 → XP_030121812.3  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A674GBK4, H0ZT46
    Conserved Domains (1) summary
    cd00899
    Location:127 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_030265948.3 → XP_030121808.3  beta-1,4-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A674GBK4, H0ZT46
    Conserved Domains (1) summary
    cd00899
    Location:127 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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