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TMED5 transmembrane p24 trafficking protein 5 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100230223, updated on 13-Aug-2024

Summary

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Gene symbol
TMED5
Gene description
transmembrane p24 trafficking protein 5
See related
Ensembl:ENSTGUG00000025954
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See TMED5 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 8 NC_044220.2 (16681912..16690577, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 8 NC_045007.1 (16715363..16724001, complement)

Chromosome 8 - NC_044220.2Genomic Context describing neighboring genes Neighboring gene divergent protein kinase domain 1A Neighboring gene metal response element binding transcription factor 2 Neighboring gene coiled-coil domain containing 18 Neighboring gene retinol dehydrogenase 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044220.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    16681912..16690577 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030279175.3 → XP_030135035.1  transmembrane emp24 domain-containing protein 5

    UniProtKB/TrEMBL
    A0A674GLW1
    Related
    ENSTGUP00000023436.1
    Conserved Domains (1) summary
    pfam01105
    Location:33 → 220
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD
Nucleotide Protein
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