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MUC6 mucin 6, oligomeric mucus/gel-forming [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100229530, updated on 13-Aug-2024

Summary

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Gene symbol
MUC6
Gene description
mucin 6, oligomeric mucus/gel-forming
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See MUC6 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
46
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 5 NC_044217.2 (16539110..16587211)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 5 NC_045004.1 (16702979..16748054)

Chromosome 5 - NC_044217.2Genomic Context describing neighboring genes Neighboring gene mucin-5B Neighboring gene mucin 2, oligomeric mucus/gel-forming Neighboring gene adaptor related protein complex 2 subunit alpha 2 Neighboring gene chitinase domain containing 1 Neighboring gene tetraspanin 4 Neighboring gene uncharacterized LOC121470062

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mucin-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044217.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    16539110..16587211
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041716554.1 → XP_041572488.1  mucin-6 isoform X20

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2424 → 2485
    GHB_like; Glycoprotein hormone beta chain homologues

  2. XM_041716555.1 → XP_041572489.1  mucin-6 isoform X21

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2408 → 2469
    GHB_like; Glycoprotein hormone beta chain homologues

  3. XM_041716552.1 → XP_041572486.1  mucin-6 isoform X18

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2572 → 2633
    GHB_like; Glycoprotein hormone beta chain homologues

  4. XM_041716553.1 → XP_041572487.1  mucin-6 isoform X19

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2425 → 2486
    GHB_like; Glycoprotein hormone beta chain homologues

  5. XM_041716546.1 → XP_041572480.1  mucin-6 isoform X12

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2721 → 2782
    GHB_like; Glycoprotein hormone beta chain homologues

  6. XM_041716551.1 → XP_041572485.1  mucin-6 isoform X17

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2573 → 2634
    GHB_like; Glycoprotein hormone beta chain homologues

  7. XM_041716549.1 → XP_041572483.1  mucin-6 isoform X15

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2720 → 2781
    GHB_like; Glycoprotein hormone beta chain homologues

  8. XM_041716534.1 → XP_041572468.1  mucin-6 isoform X1

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2870 → 2931
    GHB_like; Glycoprotein hormone beta chain homologues

  9. XM_041716536.1 → XP_041572470.1  mucin-6 isoform X3

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2869 → 2930
    GHB_like; Glycoprotein hormone beta chain homologues

  10. XM_041716537.1 → XP_041572471.1  mucin-6 isoform X4

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2869 → 2930
    GHB_like; Glycoprotein hormone beta chain homologues

  11. XM_041716548.1 → XP_041572482.1  mucin-6 isoform X14

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2721 → 2782
    GHB_like; Glycoprotein hormone beta chain homologues

  12. XM_041716539.1 → XP_041572473.1  mucin-6 isoform X6

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2869 → 2930
    GHB_like; Glycoprotein hormone beta chain homologues

  13. XM_041716541.1 → XP_041572475.1  mucin-6 isoform X8

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2856 → 2917
    GHB_like; Glycoprotein hormone beta chain homologues

  14. XM_041716545.1 → XP_041572479.1  mucin-6 isoform X11

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2722 → 2783
    GHB_like; Glycoprotein hormone beta chain homologues

  15. XM_041716550.1 → XP_041572484.1  mucin-6 isoform X16

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2574 → 2635
    GHB_like; Glycoprotein hormone beta chain homologues

  16. XM_041716538.1 → XP_041572472.1  mucin-6 isoform X5

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2869 → 2930
    GHB_like; Glycoprotein hormone beta chain homologues

  17. XM_041716535.1 → XP_041572469.1  mucin-6 isoform X2

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2869 → 2930
    GHB_like; Glycoprotein hormone beta chain homologues

  18. XM_041716543.1 → XP_041572477.1  mucin-6 isoform X9

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2854 → 2915
    GHB_like; Glycoprotein hormone beta chain homologues

  19. XM_041716540.1 → XP_041572474.1  mucin-6 isoform X7

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2856 → 2917
    GHB_like; Glycoprotein hormone beta chain homologues

  20. XM_041716544.1 → XP_041572478.1  mucin-6 isoform X10

    Conserved Domains (7) summary
    smart00215
    Location:358 → 402
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:45 → 188
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1053 → 1127
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:867 → 1018
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:590 → 659
    C8; C8 domain
    cd19941
    Location:301 → 356
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2852 → 2913
    GHB_like; Glycoprotein hormone beta chain homologues

  21. XM_041716547.1 → XP_041572481.1  mucin-6 isoform X13

    Conserved Domains (7) summary
    smart00215
    Location:376 → 420
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:63 → 206
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1071 → 1145
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:885 → 1036
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:608 → 677
    C8; C8 domain
    cd19941
    Location:319 → 374
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2721 → 2782
    GHB_like; Glycoprotein hormone beta chain homologues

  22. XM_041716556.1 → XP_041572490.1  mucin-6 isoform X22

    Conserved Domains (7) summary
    smart00215
    Location:358 → 402
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:45 → 188
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:1053 → 1127
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:867 → 1018
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:590 → 659
    C8; C8 domain
    cd19941
    Location:301 → 356
    TIL; trypsin inhibitor-like cysteine rich domain
    cl21545
    Location:2851 → 2912
    GHB_like; Glycoprotein hormone beta chain homologues
Nucleotide Protein
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