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FMOD fibromodulin [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100229381, updated on 8-Mar-2024

Summary

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Gene symbol
FMOD
Gene description
fibromodulin
See related
Ensembl:ENSTGUG00000017456
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See FMOD in Genome Data Viewer
Location:
chromosome: 26
Exon count:
3
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 26 NC_044238.2 (2527884..2541080, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 26 NC_045024.1 (2455208..2466743, complement)

Chromosome 26 - NC_044238.2Genomic Context describing neighboring genes Neighboring gene chitinase acidic Neighboring gene BTG anti-proliferation factor 2 Neighboring gene proline and arginine rich end leucine rich repeat protein Neighboring gene opticin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fibromodulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044238.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    2527884..2541080 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030292108.3 → XP_030147968.3  fibromodulin

    UniProtKB/TrEMBL
    H1A4C1
    Conserved Domains (2) summary
    PRK15370
    Location:87 → 356
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    sd00033
    Location:113 → 136
    LRR_RI; leucine-rich repeat [structural motif]

  2. XM_030292107.3 → XP_030147967.3  fibromodulin

    UniProtKB/TrEMBL
    H1A4C1
    Conserved Domains (2) summary
    PRK15370
    Location:87 → 356
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    sd00033
    Location:113 → 136
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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