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GMPPA GDP-mannose pyrophosphorylase A [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100228462, updated on 13-Aug-2024

Summary

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Gene symbol
GMPPA
Gene description
GDP-mannose pyrophosphorylase A
See related
Ensembl:ENSTGUG00000006138
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See GMPPA in Genome Data Viewer
Location:
chromosome: 7
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 7 NC_044219.2 (10375724..10380706)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 7 NC_045006.1 (10321780..10326689)

Chromosome 7 - NC_044219.2Genomic Context describing neighboring genes Neighboring gene desmin Neighboring gene striated muscle enriched protein kinase Neighboring gene rac GTPase-activating protein 1 Neighboring gene acid sensing ion channel subunit family member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-1-phosphate guanyltransferase alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044219.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    10375724..10380706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012574852.4 → XP_012430306.1  mannose-1-phosphate guanyltransferase alpha isoform X1

    UniProtKB/TrEMBL
    A0A674G976, A0A674GRC0
    Related
    ENSTGUP00000024977.1
    Conserved Domains (2) summary
    cd06428
    Location:5 → 269
    M1P_guanylylT_A_like_N; N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase
    cl00160
    Location:297 → 363
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...

  2. XM_002196204.6 → XP_002196240.1  mannose-1-phosphate guanyltransferase alpha isoform X2

    UniProtKB/TrEMBL
    A0A674G976, A0A674HLF9
    Related
    ENSTGUP00000035813.1
    Conserved Domains (2) summary
    cd06428
    Location:5 → 264
    M1P_guanylylT_A_like_N; N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase
    cl00160
    Location:292 → 358
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...

  3. XM_030277363.3 → XP_030133223.1  mannose-1-phosphate guanyltransferase alpha isoform X3

    UniProtKB/TrEMBL
    A0A674G976
    Conserved Domains (2) summary
    cd06428
    Location:1 → 233
    M1P_guanylylT_A_like_N; N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase
    cl00160
    Location:261 → 327
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...
Nucleotide Protein
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