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ASCC3 activating signal cointegrator 1 complex subunit 3 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100228272, updated on 13-Aug-2024

Summary

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Gene symbol
ASCC3
Gene description
activating signal cointegrator 1 complex subunit 3
See related
Ensembl:ENSTGUG00000012262
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See ASCC3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
42
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 3 NC_044214.2 (40739775..40991730, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 3 NC_045001.1 (39798448..40050887, complement)

Chromosome 3 - NC_044214.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116808024 Neighboring gene SIM bHLH transcription factor 1 Neighboring gene glutamate ionotropic receptor kainate type subunit 2 Neighboring gene uncharacterized LOC121469693

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
activating signal cointegrator 1 complex subunit 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044214.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    40739775..40991730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002196594.6 → XP_002196630.3  activating signal cointegrator 1 complex subunit 3

    UniProtKB/TrEMBL
    H0ZPV5
    Conserved Domains (3) summary
    smart00973
    Location:1821 → 2186
    Sec63; Sec63 Brl domain
    COG1204
    Location:449 → 1253
    BRR2; Replicative superfamily II helicase [Replication, recombination and repair]
    cd18022
    Location:1335 → 1523
    DEXHc_ASCC3_2; C-terminal DEXH-box helicase domain of Activating signal cointegrator 1 complex subunit 3
Nucleotide Protein
Heading Accession and Version

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