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DDX4 DEAD-box helicase 4 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100227744, updated on 13-Aug-2024

Summary

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Gene symbol
DDX4
Gene description
DEAD-box helicase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See DDX4 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
16
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) Z NC_044241.2 (50098518..50118178)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) Z NC_045027.1 (52548190..52583496)

Chromosome Z - NC_044241.2Genomic Context describing neighboring genes Neighboring gene phospholipid phosphatase 1 Neighboring gene uncharacterized LOC121468161 Neighboring gene solute carrier family 38 member 9 Neighboring gene interleukin 31 receptor A Neighboring gene interleukin 6 cytokine family signal transducer

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in gamete generation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044241.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    50098518..50118178
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041711256.1 → XP_041567190.1  probable ATP-dependent RNA helicase DDX4 isoform X2

    Conserved Domains (2) summary
    cd18787
    Location:424 → 553
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd18052
    Location:155 → 418
    DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4

  2. XM_041711255.1 → XP_041567189.1  probable ATP-dependent RNA helicase DDX4 isoform X1

    Conserved Domains (2) summary
    cd18787
    Location:425 → 554
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd18052
    Location:156 → 419
    DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4

  3. XM_041711257.1 → XP_041567191.1  probable ATP-dependent RNA helicase DDX4 isoform X3

    Conserved Domains (2) summary
    cd18787
    Location:396 → 525
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd18052
    Location:127 → 390
    DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
Nucleotide Protein
Heading Accession and Version

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