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ECHDC1 ethylmalonyl-CoA decarboxylase 1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100227322, updated on 13-Aug-2024

Summary

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Gene symbol
ECHDC1
Gene description
ethylmalonyl-CoA decarboxylase 1
See related
Ensembl:ENSTGUG00000011765
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See ECHDC1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 3 NC_044214.2 (52421085..52464649, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 3 NC_045001.1 (51447583..51491190, complement)

Chromosome 3 - NC_044214.2Genomic Context describing neighboring genes Neighboring gene R-spondin 3 Neighboring gene uncharacterized LOC121469710 Neighboring gene ring finger protein 146 Neighboring gene uncharacterized LOC115494327 Neighboring gene uncharacterized LOC116808034 Neighboring gene MTCL family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enoyl-CoA hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylmalonyl-CoA decarboxylase
Names
enoyl CoA hydratase domain containing 1
enoyl Coenzyme A hydratase domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044214.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    52421085..52464649 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030267836.3 → XP_030123696.1  ethylmalonyl-CoA decarboxylase

    UniProtKB/TrEMBL
    A0A674HVI8, H0ZNE7
    Related
    ENSTGUP00000012123.2
    Conserved Domains (1) summary
    cd06558
    Location:54 → 241
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

  2. XM_030267840.3 → XP_030123700.1  ethylmalonyl-CoA decarboxylase

    UniProtKB/TrEMBL
    A0A674HVI8, H0ZNE7
    Conserved Domains (1) summary
    cd06558
    Location:54 → 241
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

  3. XM_032747288.2 → XP_032603179.1  ethylmalonyl-CoA decarboxylase

    UniProtKB/TrEMBL
    A0A674HVI8, H0ZNE7
    Conserved Domains (1) summary
    cd06558
    Location:54 → 241
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

  4. XM_030267838.3 → XP_030123698.1  ethylmalonyl-CoA decarboxylase

    UniProtKB/TrEMBL
    A0A674HVI8, H0ZNE7
    Conserved Domains (1) summary
    cd06558
    Location:54 → 241
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

  5. XM_012572700.4 → XP_012428154.1  ethylmalonyl-CoA decarboxylase

    See identical proteins and their annotated locations for XP_012428154.1

    UniProtKB/TrEMBL
    A0A674HVI8, H0ZNE7
    Conserved Domains (1) summary
    cd06558
    Location:54 → 241
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

  6. XM_030267837.3 → XP_030123697.1  ethylmalonyl-CoA decarboxylase

    UniProtKB/TrEMBL
    A0A674HVI8, H0ZNE7
    Conserved Domains (1) summary
    cd06558
    Location:54 → 241
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

  7. XM_032747289.2 → XP_032603180.1  ethylmalonyl-CoA decarboxylase

    UniProtKB/TrEMBL
    A0A674HVI8, H0ZNE7
    Conserved Domains (1) summary
    cd06558
    Location:54 → 241
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

  8. XM_030267841.3 → XP_030123701.1  ethylmalonyl-CoA decarboxylase

    UniProtKB/TrEMBL
    A0A674HVI8, H0ZNE7
    Conserved Domains (1) summary
    cd06558
    Location:54 → 241
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
Nucleotide Protein
Heading Accession and Version

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