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ACO2 aconitase 2 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100227287, updated on 13-Aug-2024

Summary

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Gene symbol
ACO2
Gene description
aconitase 2
See related
Ensembl:ENSTGUG00000009907
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See ACO2 in Genome Data Viewer
Location:
chromosome: 1A
Exon count:
19
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 1A NC_044212.2 (48012366..48034649, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 1A NC_044999.1 (47409923..47432093, complement)

Chromosome 1A - NC_044212.2Genomic Context describing neighboring genes Neighboring gene cold shock domain containing C2 Neighboring gene RNA polymerase III subunit H Neighboring gene PHD finger protein 5A Neighboring gene transducer of ERBB2, 2 Neighboring gene TEF transcription factor, PAR bZIP family member

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aconitate hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aconitate hydratase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044212.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    48012366..48034649 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002197386.6 → XP_002197422.1  aconitate hydratase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    H0ZI30
    Related
    ENSTGUP00000010247.2
    Conserved Domains (1) summary
    TIGR01340
    Location:47 → 777
    aconitase_mito; aconitate hydratase, mitochondrial

  2. XM_041713800.1 → XP_041569734.1  aconitate hydratase, mitochondrial isoform X2

    Conserved Domains (1) summary
    TIGR01340
    Location:12 → 742
    aconitase_mito; aconitate hydratase, mitochondrial
Nucleotide Protein
Heading Accession and Version

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