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CHKA choline kinase alpha [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100225770, updated on 13-Aug-2024

Summary

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Gene symbol
CHKA
Gene description
choline kinase alpha
See related
Ensembl:ENSTGUG00000009915
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See CHKA in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 5 NC_044217.2 (17738962..17761245, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 5 NC_045004.1 (17916274..17938609, complement)

Chromosome 5 - NC_044217.2Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene ribonuclease/angiogenin inhibitor 1 Neighboring gene uncharacterized LOC115495490 Neighboring gene lysine methyltransferase 5B Neighboring gene uncharacterized LOC115495491

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolamine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline kinase alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044217.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    17738962..17761245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030274055.3 → XP_030129915.1  choline kinase alpha isoform X2

    UniProtKB/TrEMBL
    A0A674GW24
    Related
    ENSTGUP00000026587.1
    Conserved Domains (1) summary
    cd05156
    Location:94 → 417
    ChoK_euk; Euykaryotic Choline Kinase

  2. XM_002199479.5 → XP_002199515.1  choline kinase alpha isoform X1

    UniProtKB/TrEMBL
    H0ZI20
    Related
    ENSTGUP00000010237.2
    Conserved Domains (1) summary
    cd05156
    Location:94 → 435
    ChoK_euk; Euykaryotic Choline Kinase
Nucleotide Protein
Heading Accession and Version

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