U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SULF1 sulfatase 1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100223056, updated on 13-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
SULF1
Gene description
sulfatase 1
See related
Ensembl:ENSTGUG00000011433
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SULF1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
25
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 2 NC_044213.2 (117841556..117964793)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 2 NC_045000.1 (119518010..119641511)

Chromosome 2 - NC_044213.2Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 Neighboring gene uncharacterized LOC115493913 Neighboring gene chromosome 2 C8orf34 homolog Neighboring gene solute carrier organic anion transporter family member 5A1 Neighboring gene PR/SET domain 14

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine-6-sulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycosaminoglycan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
extracellular sulfatase Sulf-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044213.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    117841556..117964793
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030266315.3 → XP_030122175.1  extracellular sulfatase Sulf-1

    UniProtKB/TrEMBL
    A0A674GUD9, A0A674H1W3
    Conserved Domains (3) summary
    cd16147
    Location:42 → 384
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:534 → 673
    DUF3740; Sulfatase protein
    cl23718
    Location:764 → 813
    ALP_like; alkaline phosphatases and sulfatases

  2. XM_012572097.4 → XP_012427551.2  extracellular sulfatase Sulf-1

    UniProtKB/TrEMBL
    A0A674GUD9, A0A674H1W3
    Conserved Domains (3) summary
    cd16147
    Location:42 → 384
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:534 → 673
    DUF3740; Sulfatase protein
    cl23718
    Location:764 → 813
    ALP_like; alkaline phosphatases and sulfatases

  3. XM_030266318.3 → XP_030122178.1  extracellular sulfatase Sulf-1

    UniProtKB/TrEMBL
    A0A674GUD9, A0A674H1W3
    Conserved Domains (3) summary
    cd16147
    Location:42 → 384
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:534 → 673
    DUF3740; Sulfatase protein
    cl23718
    Location:764 → 813
    ALP_like; alkaline phosphatases and sulfatases

  4. XM_030266316.3 → XP_030122176.1  extracellular sulfatase Sulf-1

    UniProtKB/TrEMBL
    A0A674GUD9, A0A674H1W3
    Related
    ENSTGUP00000026036.1
    Conserved Domains (3) summary
    cd16147
    Location:42 → 384
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:534 → 673
    DUF3740; Sulfatase protein
    cl23718
    Location:764 → 813
    ALP_like; alkaline phosphatases and sulfatases

  5. XM_002199032.6 → XP_002199068.2  extracellular sulfatase Sulf-1

    UniProtKB/TrEMBL
    A0A674GUD9, A0A674H1W3
    Conserved Domains (3) summary
    cd16147
    Location:42 → 384
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:534 → 673
    DUF3740; Sulfatase protein
    cl23718
    Location:764 → 813
    ALP_like; alkaline phosphatases and sulfatases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.