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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100222736, updated on 13-Aug-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
See related
Ensembl:ENSTGUG00000013440
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
20
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 1 NC_044211.2 (19805151..19882129, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 1 NC_044998.1 (19590621..19663533, complement)

Chromosome 1 - NC_044211.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115493699 Neighboring gene collagen type VIII alpha 1 chain Neighboring gene uncharacterized LOC116807808 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene coproporphyrinogen oxidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase
Names
alpha2,3-sialyltransferase VI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044211.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    19805151..19882129 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032746678.2 → XP_032602569.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:138 → 334
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_030265063.3 → XP_030120923.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:138 → 334
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_032746690.2 → XP_032602581.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X6

    Conserved Domains (1) summary
    pfam00777
    Location:51 → 251
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_030265090.3 → XP_030120950.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

    Conserved Domains (1) summary
    pfam00777
    Location:111 → 307
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_030265103.3 → XP_030120963.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X5

    Conserved Domains (1) summary
    pfam00777
    Location:78 → 278
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  6. XM_032746682.2 → XP_032602573.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

    Conserved Domains (1) summary
    pfam00777
    Location:111 → 307
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  7. XM_030265124.2 → XP_030120984.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:138 → 334
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  8. XM_030265133.1 → XP_030120993.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:138 → 334
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  9. XM_041714090.1 → XP_041570024.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

    Conserved Domains (1) summary
    pfam00777
    Location:111 → 307
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  10. XM_030265070.2 → XP_030120930.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:138 → 334
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  11. XM_041714074.1 → XP_041570008.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:138 → 334
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  12. XM_030265079.3 → XP_030120939.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:138 → 334
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  13. XM_030265084.3 → XP_030120944.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A674HRB6, H0ZT92
    Related
    ENSTGUP00000013838.1
    Conserved Domains (1) summary
    pfam00777
    Location:138 → 356
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  14. XM_030265097.3 → XP_030120957.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X4

    UniProtKB/TrEMBL
    A0A674G7Z9, A0A674HRB6
    Related
    ENSTGUP00000018827.1
    Conserved Domains (1) summary
    pfam00777
    Location:111 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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