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GCK glucokinase [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100222236, updated on 13-Aug-2024

Summary

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Gene symbol
GCK
Gene description
glucokinase
See related
Ensembl:ENSTGUG00000003490
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See GCK in Genome Data Viewer
Location:
chromosome: 22
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 22 NC_044234.2 (4471082..4477419, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 22 NC_045020.1 (4508719..4514915, complement)

Chromosome 22 - NC_044234.2Genomic Context describing neighboring genes Neighboring gene AE binding protein 1 Neighboring gene DNA polymerase delta 2, accessory subunit Neighboring gene antimicrobial peptide NK-lysin Neighboring gene YKT6 v-SNARE homolog Neighboring gene calcium/calmodulin dependent protein kinase II beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables D-glucose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fructokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucose 6-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular glucose homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of insulin secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hexokinase-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044234.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    4471082..4477419 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030290112.3 → XP_030145972.1  hexokinase-4 isoform X1

    UniProtKB/TrEMBL
    H0YZB2
    Related
    ENSTGUP00000003646.2
    Conserved Domains (2) summary
    pfam00349
    Location:15 → 215
    Hexokinase_1
    pfam03727
    Location:221 → 455
    Hexokinase_2

  2. XM_030290113.3 → XP_030145973.1  hexokinase-4 isoform X2

    Conserved Domains (1) summary
    pfam03727
    Location:1 → 158
    Hexokinase_2
Nucleotide Protein
Heading Accession and Version

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