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TRMT11 tRNA methyltransferase 11 homolog [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100221498, updated on 13-Aug-2024

Summary

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Gene symbol
TRMT11
Gene description
tRNA methyltransferase 11 homolog
See related
Ensembl:ENSTGUG00000011774
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See TRMT11 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 3 NC_044214.2 (51892888..51917002)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 3 NC_045001.1 (50921815..50946139)

Chromosome 3 - NC_044214.2Genomic Context describing neighboring genes Neighboring gene histidine triad nucleotide binding protein 3 Neighboring gene uncharacterized LOC115494323 Neighboring gene uncharacterized LOC116808104 Neighboring gene uncharacterized LOC115494324

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA (guanine(10)-N2)-methyltransferase homolog
Names
tRNA guanosine-2'-O-methyltransferase TRM11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044214.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    51892888..51917002
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002187007.5 → XP_002187043.1  tRNA (guanine(10)-N2)-methyltransferase homolog

    UniProtKB/TrEMBL
    A0A674HM43
    Related
    ENSTGUP00000012136.2
    Conserved Domains (1) summary
    COG1041
    Location:16 → 414
    Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]

RNA

  1. XR_003959295.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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