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DPH5 diphthamide biosynthesis 5 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100219750, updated on 13-Aug-2024

Summary

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Gene symbol
DPH5
Gene description
diphthamide biosynthesis 5
See related
Ensembl:ENSTGUG00000005034
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See DPH5 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 8 NC_044220.2 (18995444..19014916, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 8 NC_045007.1 (19023405..19044637, complement)

Chromosome 8 - NC_044220.2Genomic Context describing neighboring genes Neighboring gene exostosin like glycosyltransferase 2 Neighboring gene solute carrier family 30 member 7 Neighboring gene uncharacterized oxidoreductase ZK1290.5 Neighboring gene sphingosine-1-phosphate receptor 1 Neighboring gene uncharacterized LOC115496225

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables diphthine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein histidyl modification to diphthamide IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
diphthine methyl ester synthase
Names
DPH5 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044220.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    18995444..19014916 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002187186.6 → XP_002187222.3  diphthine methyl ester synthase

    UniProtKB/TrEMBL
    A0A674GMC5, H0Z3P0
    Conserved Domains (1) summary
    PTZ00175
    Location:1 → 270
    PTZ00175; diphthine synthase; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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